ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8ZKQ5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8ZKQ5_F1_nD1

Q8ZKQ5_F1_nD1

UID: 003975441

AlphaFold

Range: 11-60
AlphaFold: AF-Q8ZKQ5
UniProt: Q8ZKQ5 (all domains)
Gene: lsrR

Protein: Transcriptional regulator LsrR (AI-2-dependent regulator LsrR) (Regulator of the lsr operon)

3D Structure

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Related Domains

Browse other domains in Sigma70_r4 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilySigma70_r4(101.1.2.61)

Pfam Families

PF04545Sigma70_r4

Sigma-70, region 4

ClanCL0123HTH

External Links

AlphaFold DB: Q8ZKQ5 UniProt: Q8ZKQ5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-60