ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ipyB1 - ECOD Domain | ECOD

ECOD/Domains/e3ipyB1

e3ipyB1

UID: 000397615

PDB

Range: B:20-260
PDB: 3IPY chain B(all domains)
UniProt: P27707 (all domains)
Gene: DCK

Molecule: Deoxycytidine kinase

3D Structure

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Related Domains

Browse other domains in dNK →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilydNK(2004.1.1.70)

Ligands

in contact, ≤ 4 Å

4-(1-benzothiophen-2-yl)-6-[4-(2-oxo-2-pyrrolidin-1-ylethyl)piperazin-1-yl]pyrimidineB87

+ 1 additive (D-Malic acid)

D-Malic acidMLT
DrugBank DB03499

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Deoxynucleoside kinase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3IPY RCSB PDB: 3IPY PDBe: 3IPY UniProt: P27707

Downloads

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