ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8ZMZ2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8ZMZ2_F1_nD1

Q8ZMZ2_F1_nD1

UID: 003976311

AlphaFold

Range: 1-125
AlphaFold: AF-Q8ZMZ2
UniProt: Q8ZMZ2 (all domains)
Gene: STM2609

Protein: Gifsy-1 prophage protein

3D Structure

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Related Domains

Browse other domains in Phage_Nu1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupPutative DNA-binding domain(101.1.9)

FFamilyPhage_Nu1(101.1.9.11)

Pfam Families

PF07471Phage_Nu1

Phage DNA packaging protein Nu1

ClanCL0123HTH

External Links

AlphaFold DB: Q8ZMZ2 UniProt: Q8ZMZ2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-125