ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8XF26_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/Q8XF26_F1_nD6

Q8XF26_F1_nD6

UID: 003976411

AlphaFold

Range: 541-609,761-945
AlphaFold: AF-Q8XF26
UniProt: Q8XF26 (all domains)
Gene: STM1009

Protein: Gifsy-1 prophage protein (Gifsy-2 prophage exodeoxyribonuclease)

3D Structure

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Related Domains

Browse other domains in DUF3799 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyDUF3799(2008.1.1.58)

Pfam Families

PF12684DUF3799

PDDEXK-like domain of unknown function (DUF3799)

ClanCL0236PDDEXK

External Links

AlphaFold DB: Q8XF26 UniProt: Q8XF26

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 541-609,761-945