ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8ZRJ3_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q8ZRJ3_F1_nD3

Q8ZRJ3_F1_nD3

UID: 003976501

AlphaFold

Range: 101-265
AlphaFold: AF-Q8ZRJ3
UniProt: Q8ZRJ3 (all domains)
Gene: STM0325

Protein: IS3 transposase

3D Structure

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Related Domains

Browse other domains in rve, rve_2 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyrve, rve_2(2484.1.1.202)

Pfam Families

Integrase core domain

ClanCL0219RNase_H

Integrase core domain

ClanCL0219RNase_H

External Links

AlphaFold DB: Q8ZRJ3 UniProt: Q8ZRJ3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 101-265