ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q8ZJU7_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8ZJU7_F1_nD2

Q8ZJU7_F1_nD2

UID: 003976640

AlphaFold

Range: 56-120
AlphaFold: AF-Q8ZJU7
UniProt: Q8ZJU7 (all domains)
Gene: rob

Protein: Transcriptional regulator Rob (Right origin-binding protein)

3D Structure

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Related Domains

Browse other domains in HTH_AraC →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyHTH_AraC(101.1.1.2)

Pfam Families

PF00165HTH_AraC

Bacterial regulatory helix-turn-helix proteins, AraC family

ClanCL0123HTH

External Links

AlphaFold DB: Q8ZJU7 UniProt: Q8ZJU7

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 56-120