ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3k3lA1 - ECOD Domain | ECOD

ECOD/Domains/e3k3lA1

e3k3lA1

UID: 000397674

PDB

Range: A:4-178
PDB: 3K3L chain A(all domains)
UniProt: P80188 (all domains)
Gene: LCN2

Molecule: Neutrophil gelatinase-associated lipocalin

3D Structure

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Related Domains

Browse other domains in Lipocalin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupLipocalins(9.1)

TT-groupLipocalins(9.1.1)

FFamilyLipocalin(9.1.1.1)

Ligands

in contact, ≤ 4 Å

2,3-Dihydroxy-Benzoic AcidDBH
drugDrugBank DB01672
2,3,-DihydroxybenzoylserineDBS
drugDrugBank DB02710

Pfam Families

PF00061Lipocalin

Lipocalin / cytosolic fatty-acid binding protein family

ClanCL0116Calycin

External Links

ECOD PDB View: 3K3L RCSB PDB: 3K3L PDBe: 3K3L UniProt: P80188

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sodium ionNA

metal

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.