ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8ZR01_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8ZR01_F1_nD1

Q8ZR01_F1_nD1

UID: 003976753

AlphaFold

Range: 41-190
AlphaFold: AF-Q8ZR01
UniProt: Q8ZR01 (all domains)
Gene: rlpA

Protein: Endolytic peptidoglycan transglycosylase RlpA (EC 4.2.2.-) (Rare lipoprotein A)

3D Structure

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Related Domains

Browse other domains in DPBB_1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupdouble psi(1.1.2)

FFamilyDPBB_1(1.1.2.9)

Pfam Families

Lytic transglycolase

ClanCL0199DPBB

External Links

AlphaFold DB: Q8ZR01 UniProt: Q8ZR01

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-190