ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q8ZMP0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8ZMP0_F1_nD1

Q8ZMP0_F1_nD1

UID: 003977291

AlphaFold

Range: 1-45
AlphaFold: AF-Q8ZMP0
UniProt: Q8ZMP0 (all domains)
Gene: STM2764

Protein: Integrase core domain protein

3D Structure

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Related Domains

Browse other domains in HTH_21 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyHTH_21(101.1.2.244)

Pfam Families

HTH-like domain

ClanCL0123HTH

External Links

AlphaFold DB: Q8ZMP0 UniProt: Q8ZMP0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-45