ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8ZMZ3_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q8ZMZ3_F1_nD3

Q8ZMZ3_F1_nD3

UID: 003978199

AlphaFold

Range: 371-610
AlphaFold: AF-Q8ZMZ3
UniProt: Q8ZMZ3 (all domains)
Gene: STM2608

Protein: Gifsy-1 prophage protein

3D Structure

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Related Domains

Browse other domains in GpA_nuclease →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyGpA_nuclease(2484.1.1.248)

Pfam Families

PF20454GpA_nuclease

Terminase large subunit gpA, endonuclease domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q8ZMZ3 UniProt: Q8ZMZ3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 371-610