ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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H9L4C2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/H9L4C2_F1_nD1

H9L4C2_F1_nD1

UID: 003978408

AlphaFold

Range: 41-375
AlphaFold: AF-H9L4C2
UniProt: H9L4C2 (all domains)
Gene: srfJ

Protein: Activated by transcription factor SsrB

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_30 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_30(2002.1.1.85)

Pfam Families

PF02055Glyco_hydro_30

Glycosyl hydrolase family 30 TIM-barrel domain

ClanCL0036TIM_barrel

External Links

AlphaFold DB: H9L4C2 UniProt: H9L4C2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-375