ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8ZPU6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8ZPU6_F1_nD1

Q8ZPU6_F1_nD1

UID: 003979088

AlphaFold

Range: 21-110
AlphaFold: AF-Q8ZPU6
UniProt: Q8ZPU6 (all domains)
Gene: cho

Protein: Excinuclease cho (EC 3.1.25.-) (Endonuclease cho) (UvrC homolog protein)

3D Structure

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Related Domains

Browse other domains in GIY-YIG_UvrC →

Classification

AArchitecturea+b three layers(a.12)

XX-groupGIY-YIG endonuclease(821)

HH-groupGIY-YIG endonuclease(821.1)

TT-groupGIY-YIG endonuclease(821.1.1)

FFamilyGIY-YIG_UvrC(821.1.1.9)

Pfam Families

PF30054GIY-YIG_UvrC

UvrC-like GIY-YIG domain

ClanCL0418GIY-YIG

External Links

AlphaFold DB: Q8ZPU6 UniProt: Q8ZPU6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-110