ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8ZLU5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8ZLU5_F1_nD2

Q8ZLU5_F1_nD2

UID: 003979373

AlphaFold

Range: 121-235
AlphaFold: AF-Q8ZLU5
UniProt: Q8ZLU5 (all domains)
Gene: yraL

Protein: Ribosomal RNA small subunit methyltransferase I (EC 2.1.1.198) (16S rRNA 2'-O-ribose C1402 methyltransferase) (rRNA (cytidine-2'-O-)-methyltransferase RsmI)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TP_methylase →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTetrapyrrole methylase C-terminal domain-like(1137)

HH-groupTetrapyrrole methylase C-terminal domain(1137.1)

TT-groupTetrapyrrole methylase C-terminal domain(1137.1.1)

FFamilyTP_methylase(1137.1.1.1)

Pfam Families

PF00590TP_methylase

Tetrapyrrole (Corrin/Porphyrin) Methylases

External Links

AlphaFold DB: Q8ZLU5 UniProt: Q8ZLU5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 121-235