ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8ZJY8_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q8ZJY8_F1_nD4

Q8ZJY8_F1_nD4

UID: 003979743

AlphaFold

Range: 441-645
AlphaFold: AF-Q8ZJY8
UniProt: Q8ZJY8 (all domains)
Gene: hsdR

Protein: Endonuclease R (EC 3.1.21.3)

3D Structure

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Related Domains

Browse other domains in ResIII →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyResIII(2004.1.1.120)

Pfam Families

Type III restriction enzyme, res subunit

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q8ZJY8 UniProt: Q8ZJY8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 441-645