ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P40788_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P40788_F1_nD2

P40788_F1_nD2

UID: 003980186

AlphaFold

Range: 126-295
AlphaFold: AF-P40788
UniProt: P40788 (all domains)
Gene: yddE

Protein: Uncharacterized isomerase YddE (EC 5.1.-.-)

3D Structure

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Related Domains

Browse other domains in PhzC-PhzF →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupDiaminopimelate epimerase-like(286)

HH-groupDiaminopimelate epimerase-like(286.1)

TT-groupDiaminopimelate epimerase-like(286.1.1)

FFamilyPhzC-PhzF(286.1.1.2)

Pfam Families

PF02567PhzC-PhzF

Phenazine biosynthesis-like protein

ClanCL0288DAP_epimerase

External Links

AlphaFold DB: P40788 UniProt: P40788

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 126-295