ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8ZPF5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8ZPF5_F1_nD2

Q8ZPF5_F1_nD2

UID: 003980315

AlphaFold

Range: 56-160,291-320
AlphaFold: AF-Q8ZPF5
UniProt: Q8ZPF5 (all domains)
Gene: STM1555

Protein: Transcriptional regulator

3D Structure

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Related Domains

Browse other domains in Peripla_BP_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyPeripla_BP_1(2007.1.2.2)

Pfam Families

PF00532Peripla_BP_1

Periplasmic binding proteins and sugar binding domain of LacI family

ClanCL0144Periplas_BP

External Links

AlphaFold DB: Q8ZPF5 UniProt: Q8ZPF5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 56-160,291-320