ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8ZQB0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8ZQB0_F1_nD1

Q8ZQB0_F1_nD1

UID: 003980786

AlphaFold

Range: 6-60
AlphaFold: AF-Q8ZQB0
UniProt: Q8ZQB0 (all domains)
Gene: STM1005

Protein: Gifsy-2 prophage integrase

3D Structure

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Related Domains

Browse other domains in Arm-DNA-bind_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDNA-binding domain(252)

HH-groupGCC-box binding domain-like(252.2)

TT-groupGCC-box binding domain-like(252.2.1)

FFamilyArm-DNA-bind_2(252.2.1.6)

Pfam Families

PF12167Arm-DNA-bind_2

Arm DNA-binding domain

ClanCL0081MBD-like

External Links

AlphaFold DB: Q8ZQB0 UniProt: Q8ZQB0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-60