ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8ZKQ5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8ZKQ5_F1_nD2

Q8ZKQ5_F1_nD2

UID: 003981041

AlphaFold

Range: 66-315
AlphaFold: AF-Q8ZKQ5
UniProt: Q8ZKQ5 (all domains)
Gene: lsrR

Protein: Transcriptional regulator LsrR (AI-2-dependent regulator LsrR) (Regulator of the lsr operon)

3D Structure

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Related Domains

Browse other domains in Sugar-bind →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNagB/RpiA/CoA transferase-like(2003.1.7)

FFamilySugar-bind(2003.1.7.8)

Pfam Families

PF04198Sugar-bind

Putative sugar-binding domain

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q8ZKQ5 UniProt: Q8ZKQ5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 66-315