ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8ZJY8_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q8ZJY8_F1_nD3

Q8ZJY8_F1_nD3

UID: 003981052

AlphaFold

Range: 236-345,371-425
AlphaFold: AF-Q8ZJY8
UniProt: Q8ZJY8 (all domains)
Gene: hsdR

Protein: Endonuclease R (EC 3.1.21.3)

3D Structure

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Related Domains

Browse other domains in T1RK_2nd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyT1RK_2nd(2008.1.1.162)

Pfam Families

PF30170T1RK_2nd

Type I restriction enzyme EcoKI endonuclease subunit second domain

ClanCL0236PDDEXK

External Links

AlphaFold DB: Q8ZJY8 UniProt: Q8ZJY8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 236-345,371-425