ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q328U4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q328U4_F1_nD1

Q328U4_F1_nD1

UID: 003982492

AlphaFold

Range: 6-60
AlphaFold: AF-Q328U4
UniProt: Q328U4 (all domains)
Gene: treR

Protein: HTH-type transcriptional regulator TreR (Trehalose operon repressor)

3D Structure

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Related Domains

Browse other domains in LacI →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-grouptetra-helical, lambda repressor-like(101.1.4)

FFamilyLacI(101.1.4.2)

Pfam Families

Bacterial regulatory proteins, lacI family

ClanCL0123HTH

External Links

AlphaFold DB: Q328U4 UniProt: Q328U4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-60