ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q7CRA4_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q7CRA4_F1_nD3

Q7CRA4_F1_nD3

UID: 003987247

AlphaFold

Range: 336-455,561-790
AlphaFold: AF-Q7CRA4
UniProt: Q7CRA4 (all domains)
Gene: pbp1b

Protein: Penicillin-binding protein 1b (EC 2.3.2.-, EC 2.4.1.129)

3D Structure

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Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyTranspeptidase(223.3.1.3)

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

AlphaFold DB: Q7CRA4 UniProt: Q7CRA4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 336-455,561-790