ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8DNB5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8DNB5_F1_nD1

Q8DNB5_F1_nD1

UID: 003987833

RepresentativeAlphaFold

Range: 1-65
AlphaFold: AF-Q8DNB5
UniProt: Q8DNB5 (all domains)
Gene: rluD

Protein: RNA pseudouridylate synthase (RNA-uridine isomerase)

3D Structure

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Related Domains

Browse other domains in RluD_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupAlpha-L RNA-binding motif(221.1.2)

FFamilyRluD_N(221.1.2.18)

Pfam Families

RluD ribosomal pseudouridine synthase N-terminal domain

External Links

AlphaFold DB: Q8DNB5 UniProt: Q8DNB5

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-65