ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8DQI9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8DQI9_F1_nD1

Q8DQI9_F1_nD1

UID: 003987839

AlphaFold

Range: 1-95
AlphaFold: AF-Q8DQI9
UniProt: Q8DQI9 (all domains)
Gene: mta

Protein: Regulator of the multidrug efflux pump pmrA

3D Structure

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Related Domains

Browse other domains in MerR-DNA-bind, MerR_1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupPutative DNA-binding domain(101.1.9)

FFamilyMerR-DNA-bind, MerR_1(101.1.9.82)

Pfam Families

PF09278MerR-DNA-bind

MerR, DNA binding

ClanCL0123HTH

MerR HTH family regulatory protein

ClanCL0123HTH

External Links

AlphaFold DB: Q8DQI9 UniProt: Q8DQI9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-95