ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8CYJ2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8CYJ2_F1_nD1

Q8CYJ2_F1_nD1

UID: 003988870

AlphaFold

Range: 1-165
AlphaFold: AF-Q8CYJ2
UniProt: Q8CYJ2 (all domains)
Gene: spr1388

Protein: UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase

3D Structure

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Related Domains

Browse other domains in Peptidase_C92 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C92(219.1.1.36)

Pfam Families

PF05708Peptidase_C92

Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family

ClanCL0125Peptidase_CA

External Links

AlphaFold DB: Q8CYJ2 UniProt: Q8CYJ2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-165