ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8DPN6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8DPN6_F1_nD1

Q8DPN6_F1_nD1

UID: 003989117

AlphaFold

Range: 16-115
AlphaFold: AF-Q8DPN6
UniProt: Q8DPN6 (all domains)
Gene: spr1079

Protein: Degenerate transposase (Orf1)

3D Structure

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Related Domains

Browse other domains in HTH_Tnp_4 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyHTH_Tnp_4(101.1.1.129)

Pfam Families

PF13613HTH_Tnp_4

Helix-turn-helix of DDE superfamily endonuclease

ClanCL0123HTH

External Links

AlphaFold DB: Q8DPN6 UniProt: Q8DPN6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-115