ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8DNR8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8DNR8_F1_nD1

Q8DNR8_F1_nD1

UID: 003989623

AlphaFold

Range: 6-135
AlphaFold: AF-Q8DNR8
UniProt: Q8DNR8 (all domains)
Gene: sunL

Protein: 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) (16S rRNA m5C967 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RsmB)

3D Structure

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Related Domains

Browse other domains in NusB →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupNusB-like(195)

HH-groupNusB-like(195.1)

TT-groupNusB-like(195.1.1)

FFamilyNusB(195.1.1.1)

Pfam Families

NusB family

ClanCL0633NusB

External Links

AlphaFold DB: Q8DNR8 UniProt: Q8DNR8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-135