ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8DNC9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8DNC9_F1_nD1

Q8DNC9_F1_nD1

UID: 003989907

AlphaFold

Range: 1-115
AlphaFold: AF-Q8DNC9
UniProt: Q8DNC9 (all domains)
Gene: rnmV

Protein: Ribonuclease M5 (EC 3.1.26.8) (RNase M5) (Ribosomal RNA terminal maturase M5)

3D Structure

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Related Domains

Browse other domains in Toprim →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupToprim domain(2006.1.3)

FFamilyToprim(2006.1.3.2)

Pfam Families

Toprim domain

ClanCL0413Toprim-like

External Links

AlphaFold DB: Q8DNC9 UniProt: Q8DNC9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-115