ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A3P7P8P1_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/A0A3P7P8P1_F1_nD6

A0A3P7P8P1_F1_nD6

UID: 003990858

RepresentativeAlphaFold

Range: 376-385,441-460,1026-1185,1211-1220,1291-1335,1357-1408
AlphaFold: AF-A0A3P7P8P1
UniProt: A0A3P7P8P1 (all domains)
Gene: DME_LOCUS2007

Protein: Mediator of RNA polymerase II transcription subunit 13

3D Structure

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Related Domains

Browse other domains in Med13_C →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyMed13_C(2484.1.1.114)

Pfam Families

PF06333Med13_C

Mediator complex subunit 13 C-terminal domain

ClanCL0219RNase_H

External Links

AlphaFold DB: A0A3P7P8P1 UniProt: A0A3P7P8P1

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 376-385,441-460,1026-1185,1211-1220,1291-1335,1357-1408