ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A158Q443_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/A0A158Q443_F1_nD5

A0A158Q443_F1_nD5

UID: 003991850

AlphaFold

Range: 536-609
AlphaFold: AF-A0A158Q443
UniProt: A0A158Q443 (all domains)
Gene: DME_LOCUS7986

Protein: Large ribosomal subunit protein uL16m (39S ribosomal protein L16, mitochondrial)

3D Structure

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Related Domains

Browse other domains in WHD_LYAR →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyWHD_LYAR(101.1.2.509)

Pfam Families

PF25879WHD_LYAR

LYAR family winged helix domain

ClanCL0123HTH

External Links

AlphaFold DB: A0A158Q443 UniProt: A0A158Q443

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 536-609