ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A158Q3E0_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/A0A158Q3E0_F1_nD5

A0A158Q3E0_F1_nD5

UID: 003992280

AlphaFold

Range: 1166-1228
AlphaFold: AF-A0A158Q3E0
UniProt: A0A158Q3E0 (all domains)
Gene: DME_LOCUS6584

Protein: Coatomer subunit alpha

3D Structure

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Related Domains

Browse other domains in COPI_C →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyCOPI_C(376.1.1.11)

Pfam Families

Coatomer (COPI) alpha subunit C-terminus

ClanCL0020TPR

External Links

AlphaFold DB: A0A158Q3E0 UniProt: A0A158Q3E0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1166-1228