ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A0N4UPV9_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A0N4UPV9_F1_nD3

A0A0N4UPV9_F1_nD3

UID: 003992907

AlphaFold

Range: 156-240
AlphaFold: AF-A0A0N4UPV9
UniProt: A0A0N4UPV9 (all domains)
Gene: DME_LOCUS3552

Protein: Ribosome maturation protein SBDS

3D Structure

Loading viewer...

Related Domains

Browse other domains in SBDS_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupEF-G C-terminal domain-like(304.24)

TT-groupEF-G C-terminal domain-like(304.24.1)

FFamilySBDS_C(304.24.1.6)

Pfam Families

SBDS protein, C-terminal domain

ClanCL0437EF-G_C

External Links

AlphaFold DB: A0A0N4UPV9 UniProt: A0A0N4UPV9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 156-240