ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A0N4UMK6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A0N4UMK6_F1_nD1

A0A0N4UMK6_F1_nD1

UID: 003993292

AlphaFold

Range: 86-145
AlphaFold: AF-A0A0N4UMK6
UniProt: A0A0N4UMK6 (all domains)
Gene: DME_LOCUS10592

Protein: SMB domain-containing protein

3D Structure

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Related Domains

Browse other domains in TSP1_spondin →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupTSP-1 type 1 repeat(922)

HH-groupTSP-1 type 1 repeat(922.1)

TT-groupTSP-1 type 1 repeat(922.1.1)

FFamilyTSP1_spondin(922.1.1.5)

Pfam Families

PF19028TSP1_spondin

Spondin-like TSP1 domain

ClanCL0692TSP1

External Links

AlphaFold DB: A0A0N4UMK6 UniProt: A0A0N4UMK6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 86-145