ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2xphB1 - ECOD Domain | ECOD

ECOD/Domains/e2xphB1

e2xphB1

UID: 000399923

PDB

Range: B:419-644
PDB: 2XPH chain B(all domains)
UniProt: Q9P0U3 (all domains)
Gene: SENP1

Molecule: Sentrin-specific protease 1 (EC 3.4.22.-) (Sentrin/SUMO-specific protease SENP1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_C48 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C48(219.1.1.16)

Pfam Families

PF02902Peptidase_C48

Ulp1 protease family, C-terminal catalytic domain

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 2XPH RCSB PDB: 2XPH PDBe: 2XPH UniProt: Q9P0U3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure