ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A0N4UL65_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A0N4UL65_F1_nD1

A0A0N4UL65_F1_nD1

UID: 003999694

AlphaFold

Range: 36-350
UniProt: A0A0N4UL65 (all domains)
Gene: DME_LOCUS10389

Protein: Nuclear pore complex protein Nup85

3D Structure

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Related Domains

Browse other domains in TPR_Nup160_C, TPR_NUP160_120_M →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupNuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains(109.26)

TT-groupNuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains(109.26.1)

FFamilyTPR_Nup160_C, TPR_NUP160_120_M(109.26.1.12)

Pfam Families

PF23347TPR_Nup160_C

Nup160 C-terminal TPR

ClanCL0020TPR

PF23354TPR_NUP160_120_M

NUP160/120 middle TPR

ClanCL0020TPR

External Links

UniProt: A0A0N4UL65

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