ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A158Q4W4_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A158Q4W4_F1_nD3

A0A158Q4W4_F1_nD3

UID: 004000117

AlphaFold

Range: 206-545
AlphaFold: AF-A0A158Q4W4
UniProt: A0A158Q4W4 (all domains)
Gene: DME_LOCUS9394

Protein: RING-type E3 ubiquitin transferase (EC 2.3.2.27)

3D Structure

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Related Domains

Browse other domains in WD40_RFWD3 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyWD40_RFWD3(5.1.4.224)

Pfam Families

PF23419WD40_RFWD3

E3 ubiquitin-protein ligase RFWD3 WD40 domain

ClanCL0186Beta_propeller

External Links

AlphaFold DB: A0A158Q4W4 UniProt: A0A158Q4W4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 206-545