ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A158Q683_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A158Q683_F1_nD3

A0A158Q683_F1_nD3

UID: 004001111

AlphaFold

Range: 671-830
AlphaFold: AF-A0A158Q683
UniProt: A0A158Q683 (all domains)
Gene: DME_LOCUS3073

Protein: DNA-directed RNA polymerase subunit (EC 2.7.7.6)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_Rpb1_3 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupfirst helical domain in RNA-polymerase beta-prime subunit(4959)

HH-groupfirst helical domain in RNA-polymerase beta-prime subunit(4959.1)

TT-groupfirst helical domain in RNA-polymerase beta-prime subunit(4959.1.1)

FFamilyRNA_pol_Rpb1_3(4959.1.1.1)

Pfam Families

PF04983RNA_pol_Rpb1_3

RNA polymerase Rpb1, domain 3

External Links

AlphaFold DB: A0A158Q683 UniProt: A0A158Q683

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 671-830