ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0N4UBK0_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A0N4UBK0_F1_nD3

A0A0N4UBK0_F1_nD3

UID: 004001480

AlphaFold

Range: 406-535
AlphaFold: AF-A0A0N4UBK0
UniProt: A0A0N4UBK0 (all domains)
Gene: DME_LOCUS8465

Protein: E3 ubiquitin-protein ligase (EC 2.3.2.27)

3D Structure

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Related Domains

Browse other domains in PRT6_C →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyPRT6_C(376.1.1.43)

Pfam Families

Proteolysis_6 C-terminal

External Links

AlphaFold DB: A0A0N4UBK0 UniProt: A0A0N4UBK0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 406-535