ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A158Q2Q1_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A158Q2Q1_F1_nD4

A0A158Q2Q1_F1_nD4

UID: 004001727

AlphaFold

Range: 351-450
AlphaFold: AF-A0A158Q2Q1
UniProt: A0A158Q2Q1 (all domains)
Gene: DME_LOCUS4955

Protein: Small ribosomal subunit protein eS28 (40S ribosomal protein S28)

3D Structure

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Related Domains

Browse other domains in Rttp106-like_middle →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPH domain-like(220)

HH-groupPH domain-like(220.1)

TT-groupPH domain-like(220.1.1)

FFamilyRttp106-like_middle(220.1.1.19)

Pfam Families

PF08512Rttp106-like_middle

Histone chaperone Rttp106-like, middle domain

ClanCL0266PH

External Links

AlphaFold DB: A0A158Q2Q1 UniProt: A0A158Q2Q1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 351-450