ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

P0A8B5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P0A8B5_F1_nD1

P0A8B5_F1_nD1

UID: 004004892

AlphaFold

Range: 11-95
AlphaFold: AF-P0A8B5
UniProt: P0A8B5 (all domains)
Gene: ybaB

Protein: Nucleoid-associated protein YbaB

3D Structure

Loading viewer...

Related Domains

Browse other domains in YbaB_DNA_bd →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibonuclease PH domain 2-like(245)

HH-groupYbaB(245.2)

TT-groupYbaB(245.2.1)

FFamilyYbaB_DNA_bd(245.2.1.1)

Pfam Families

PF02575YbaB_DNA_bd

YbaB/EbfC DNA-binding family

ClanCL0717YbaB

External Links

AlphaFold DB: P0A8B5 UniProt: P0A8B5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-95