ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P62623_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/P62623_F1_nD3

P62623_F1_nD3

UID: 004004996

AlphaFold

Range: 196-310
AlphaFold: AF-P62623
UniProt: P62623 (all domains)
Gene: ispH

Protein: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (HMBPP reductase) (EC 1.17.7.4) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase)

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase(7588)

HH-groupNadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase(7588.1)

TT-groupNadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase(7588.1.1)

FFamilyLYTB(7588.1.1.1)

Pfam Families

LytB protein

External Links

AlphaFold DB: P62623 UniProt: P62623

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 196-310