ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

P22525_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P22525_F1_nD2

P22525_F1_nD2

UID: 004005121

AlphaFold

Range: 211-265,318-370
AlphaFold: AF-P22525
UniProt: P22525 (all domains)
Gene: ycbB

Protein: Probable L,D-transpeptidase YcbB (EC 2.-.-.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in PG_binding_1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupPGBD-like(144)

HH-groupPGBD-like(144.1)

TT-groupPGBD-like(144.1.1)

FFamilyPG_binding_1(144.1.1.1)

Pfam Families

PF01471PG_binding_1

Putative peptidoglycan binding domain

ClanCL0244PGBD

External Links

AlphaFold DB: P22525 UniProt: P22525

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 211-265,318-370