ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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P0A8I1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P0A8I1_F1_nD1

P0A8I1_F1_nD1

UID: 004005173

AlphaFold

Range: 1-135
AlphaFold: AF-P0A8I1
UniProt: P0A8I1 (all domains)
Gene: yqgF

Protein: Putative pre-16S rRNA nuclease (EC 3.1.-.-)

3D Structure

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Related Domains

Browse other domains in RuvX →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRuvX(2484.1.1.40)

Pfam Families

Holliday junction resolvase

ClanCL0580YqgF

External Links

AlphaFold DB: P0A8I1 UniProt: P0A8I1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-135