ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q46891_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q46891_F1_nD1

Q46891_F1_nD1

UID: 004005973

AlphaFold

Range: 1-255
AlphaFold: AF-Q46891
UniProt: Q46891 (all domains)
Gene: otnI

Protein: 2-oxo-tetronate isomerase (EC 5.3.1.35) (2-dehydrotetronate isomerase) (Glyoxylate-induced protein YgbM)

3D Structure

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Related Domains

Browse other domains in AP_endonuc_2 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAP_endonuc_2(2002.1.1.60)

Pfam Families

PF01261AP_endonuc_2

Xylose isomerase-like TIM barrel

ClanCL0036TIM_barrel

External Links

AlphaFold DB: Q46891 UniProt: Q46891

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-255