ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

P0A873_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P0A873_F1_nD1

P0A873_F1_nD1

UID: 004006201

AlphaFold

Range: 1-250
AlphaFold: AF-P0A873
UniProt: P0A873 (all domains)
Gene: trmD

Protein: tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in tRNA_m1G_MT →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilytRNA_m1G_MT(2488.1.1.3)

Pfam Families

PF01746tRNA_m1G_MT

tRNA (Guanine-1)-methyltransferase TrmD

ClanCL0098SPOUT

External Links

AlphaFold DB: P0A873 UniProt: P0A873

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-250