ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

P13009_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P13009_F1_nD1

P13009_F1_nD1

UID: 004006313

AlphaFold

Range: 6-335
AlphaFold: AF-P13009
UniProt: P13009 (all domains)
Gene: metH

Protein: Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12-dependent) (MS)

3D Structure

Loading viewer...

Related Domains

Browse other domains in S-methyl_trans →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyS-methyl_trans(2002.1.1.96)

Pfam Families

PF02574S-methyl_trans

Homocysteine S-methyltransferase

ClanCL0036TIM_barrel

External Links

AlphaFold DB: P13009 UniProt: P13009

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-335