ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P52129_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P52129_F1_nD2

P52129_F1_nD2

UID: 004006559

AlphaFold

Range: 101-180
AlphaFold: AF-P52129
UniProt: P52129 (all domains)
Gene: rnlA

Protein: mRNA endoribonuclease toxin LS (EC 3.1.-.-) (RNase LS) (Toxin LS)

3D Structure

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Related Domains

Browse other domains in RnlA_toxin →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupToxin RnlA N-terminal domains(331.19)

TT-groupToxin RnlA N-terminal domains(331.19.1)

FFamilyRnlA_toxin(331.19.1.1)

Pfam Families

PF15935RnlA_toxin

RNase LS, bacterial toxin

External Links

AlphaFold DB: P52129 UniProt: P52129

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 101-180