ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P33013_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P33013_F1_nD1

P33013_F1_nD1

UID: 004006607

AlphaFold

Range: 56-180
AlphaFold: AF-P33013
UniProt: P33013 (all domains)
Gene: dacD

Protein: D-alanyl-D-alanine carboxypeptidase DacD (DD-carboxypeptidase) (DD-peptidase) (EC 3.4.16.4) (Penicillin-binding protein 6b) (PBP-6b)

3D Structure

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Related Domains

Browse other domains in Peptidase_S11 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019)

HH-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1)

TT-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1.1)

FFamilyPeptidase_S11(4019.1.1.2)

Pfam Families

PF00768Peptidase_S11

D-alanyl-D-alanine carboxypeptidase

ClanCL0013Beta-lactamase

External Links

AlphaFold DB: P33013 UniProt: P33013

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 56-180