ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P45956_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P45956_F1_nD1

P45956_F1_nD1

UID: 004006965

AlphaFold

Range: 1-90
AlphaFold: AF-P45956
UniProt: P45956 (all domains)
Gene: ygbF

Protein: CRISPR-associated endoribonuclease Cas2 (EC 3.1.-.-)

3D Structure

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Related Domains

Browse other domains in Cas_Cas2CT1978 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR associated protein Cas2-like(304.56)

TT-groupCRISPR associated protein Cas2-like(304.56.1)

FFamilyCas_Cas2CT1978(304.56.1.1)

Pfam Families

PF09707Cas_Cas2CT1978

CRISPR-associated protein (Cas_Cas2CT1978)

ClanCL0728Cas2

External Links

AlphaFold DB: P45956 UniProt: P45956

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-90