ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P39347_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/P39347_F1_nD3

P39347_F1_nD3

UID: 004007467

AlphaFold

Range: 176-395
AlphaFold: AF-P39347
UniProt: P39347 (all domains)
Gene: intB

Protein: Putative protein IntB (Int(P4)) (Putative prophage P4 integrase)

3D Structure

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Related Domains

Browse other domains in Phage_integrase →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupDNA breaking-rejoining enzymes(101.1.8)

FFamilyPhage_integrase(101.1.8.1)

Pfam Families

PF00589Phage_integrase

Phage integrase family

ClanCL0382DNA-mend

External Links

AlphaFold DB: P39347 UniProt: P39347

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 176-395