ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

P0AEI1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P0AEI1_F1_nD1

P0AEI1_F1_nD1

UID: 004007850

AlphaFold

Range: 1-145
AlphaFold: AF-P0AEI1
UniProt: P0AEI1 (all domains)
Gene: miaB

Protein: tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase (EC 2.8.4.3) ((Dimethylallyl)adenosine tRNA methylthiotransferase MiaB) (tRNA-i(6)A37 methylthiotransferase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in UPF0004 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupCheY-like(2007.1.3)

FFamilyUPF0004(2007.1.3.2)

Pfam Families

PF00919UPF0004

Uncharacterized protein family UPF0004

ClanCL0304CheY

External Links

AlphaFold DB: P0AEI1 UniProt: P0AEI1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-145